Tough Seahawks defense provides lessons for Kaepernick

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Tough Seahawks defense provides lessons for Kaepernick

SEATTLE -- Coach Jim Harbaugh knew there would be games like this for Colin Kaepernick.

The second-year player struggled with the crowd noise Sunday night against the Seattle Seahawks in the 49ers' 42-13 loss in front of a national television audience. He threw an interception in the end zone, and had a couple other attempts that could have been picked off, too.

[MAIOCCO: Instant Replay -- 49ers shamed in Seattle]

But Harbaugh said he is giving no thought to making a switch back to Alex Smith. When asked if there's any question that Kaepernick is his starter, Harbaugh said, "Yeah, I don't believe there's a question about that."

Kaepernick completed 19 of 36 passes for 244 yards with one touchdown and one interception for a season-low passer rating of 72.0 in his six starts. Harbaugh wanted Kaepernick to get seven starts to finish the regular season to prepare his young quarterback for the playoffs.

"Everybody's going to feel the same way after this," Harbaugh said. "This wasn't good. Can't feel like you coached well. Can't feel like you played well after this one."

Said Kaepernick, "Every time you're on the field you learn something, so we just have to take what we can from this game and move on."

Kaepernick opened the game with three consecutive incompletions. Seattle immediately scored a touchdown. After the 49ers' first two possessions, Kaepernick completed just 1 of 5 attempts for minus-1 yard. And after just 10 minutes, the 49ers trailed 14-0.

"He did his job," 49ers tight end Delanie Walker said. "It takes the other 10 players to help him and make plays for him, and we didn't do that."

In the first half, the 49ers were called for two delay-of-game penalties. Kaepernick called timeouts on two other occasions with the play clock winding down.

"It's loud in other stadiums, too," said Kaepernick, who was named NFC Offensive Player of the Week after throwing four touchdowns in the 49ers' win last week over the New England Patriots. "It's something you just have to get used to on the road. . . We just have to get in and out of the huddle. That is something that we can control."

Said Seattle coach Pete Carroll, "They had a little bit of trouble tonight with the clock. They got some delays tonight for whatever reason. They are very deliberate, one of the slowest teams in terms of that. Tonight it caught them a couple of times."

Taking a closer look at Ryan's criticism of Shanahan

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Taking a closer look at Ryan's criticism of Shanahan

There is no shortage of blame to go around for the Atlanta Falcons’ collapse in Super Bowl 51.

The Falcons built a 28-3 lead in the middle of the third quarter and let it slip away, ultimately falling to the New England Patriots, 34-28, in overtime.

Matt Ryan voiced one previously undisclosed factor in the collapse this week in an interview with Pete Prisco of CBS Sports, pointing the finger at the new coach of the 49ers.

Kyle Shanahan has been the focus of a lot of the blame, but critique from the league MVP was a new one.

The Falcons quarterback faulted his former offensive coordinator for taking too much time to relay the play calls. Ryan said he did not have enough time to change any of the plays – presumably checking out of called pass plays to run the ball.

Here’s what Ryan told Prisco:

"Kyle's play calls -- he would take time to get stuff in. As I was getting it, you're looking at the clock and you're talking 16 seconds before it cuts out. You don't have a lot of time to say, 'There's 16 seconds, no, no, no, we're not going to do that. Hey, guys, we're going to line up and run this.' You're talking about breaking the huddle at seven seconds if you do something along the lines.

"With the way Kyle's system was set up, he took more time to call plays and we shift and motion a lot more than we did with (former coordinator) Dirk (Koetter). You couldn't get out of stuff like that. We talk about being the most aggressive team in football. And I'm all for it. But there's also winning time. You're not being aggressive not running it there."

The 49ers can point to mismanagement of the clock for their own Super Bowl heartbreak. The 49ers’ offense had the perfect play call at the perfect time against the Baltimore Ravens late in Super Bowl XLVII.

But with the play clock striking :00, coach Jim Harbaugh was forced to call a timeout from the sideline. A split-second later, the ball was snapped and it appeared the quarterback run would have easily ended up with Colin Kaepernick in the end zone.

Much like after the 49ers’ loss, the Falcons left plenty of room for second-guessing.

Two of Shanahan’s plays calls, which directly led to the collapse, will forever be scrutinized.

The first came with 8:31 remaining in regulation and the Falcons holding a 28-12 lead. On third and 1 from the Atlanta 36, Shanahan did not remain conservative with an expected run play. He swung for the fence.

Receiver Aldrick Robinson, whom the 49ers added this offseason as a free-agent pickup, was breaking free past the Patriots secondary for what could have been a touchdown. But just as Ryan was unloading, New England linebacker Dont’a Hightower hit him and forced the fumble. Running back Devonta Freeman whiffed on blitz pickup, which would have provided Ryan with enough time to target Robinson deep.

Ryan’s explanation does not appear applicable on this play, though. In watching the replay, the Falcons broke the huddle with more than 25 seconds remaining on the play clock and the snap occurred with :15 to spare.

The other questionable sequence came after the Falcons – leading by eight points -- got to the New England 22-yard line with less than five minutes to play. The Falcons lost 1 yard on a run play on first down.

On second down, Ryan was sacked for a 12-yard loss. Before that play, the Falcons broke the huddle with :19 on the play clock. The snap occurred with :04 remaining. The game clock was running, so the Falcons had reason to attempt to burn as much clock as possible.

In the fourth quarter, the Falcons never seemed rushed to get off a play. The closest they came to delay-of-game penalties were when they snapped the ball with :04 on the one play and :03 another time. The majority of their snaps occurred with :10 or more seconds to spare.

If the Falcons were guilty of anything when it came to the play clock, it was that the offense did not waste more time. After New England pulled to within 28-9 late in the third quarter, the Falcons ran only six offensive plays while the game clock was running.

On those six plays, the Falcons snapped the ball with :13, :09, :14, :20, :13 and :04 remaining on the play clock. If they’d snapped the ball with one second remaining each time, they could have shortened the game by 1 minute, 7 seconds. The Patriots scored the game-tying touchdown with :57 remaining in regulation.

Uh-oh: Is Kyle Shanahan going to be Harbaugh-tastic in his timing?

Uh-oh: Is Kyle Shanahan going to be Harbaugh-tastic in his timing?

Until now, Kyle Shanahan’s hiring by the San Fracisco 49ers looked great because of his two-and-a-half predecessors – the last days of Jim Harbaugh, the misplaced concept of Jim Tomsula and the couldn’t-make-chicken-marsala-out-of-old-Kleenex problems surrounding Chip Kelly.

But now, Atlanta Falcons quarterback Matt Ryan has told us all that Shanahan has a gift we in the Bay Area know all too well. Specifically, that Shanahan took too long to call plays to the Super Bowl the Falcons vomited up to the New England Patriots.

Now who does that remind you of, over and over again?

Yes, some things are evergreen, and too many options in this overly technological age seems to be one of them. Data in is helpful, but command going out is what bells the cow. Ryan said Shanahan was, well, almost Harbaugh-tastic in his timing.

“Kyle’s play calls -- he would take time to get stuff in,” Ryan told Bleacher Report. “As I was getting it, you're looking at the clock and you’re talking 16 seconds before it cuts out. You don't have a lot of time to say, ‘There's 16 seconds, no, no, no, we're not going to do that. Hey, guys, we're going to line up and run this.’ You're talking about breaking the huddle at seven seconds if you do something along the lines.

“With the way Kyle's system was set up, he took more time to call plays and we shift and motion a lot more than we did with (former coordinator) Dirk (Koetter). You couldn't get out of stuff like that. We talk about being the most aggressive team in football. And I'm all for it. But there's also winning time. You’re not being aggressive not running it there.”

And the reason this matters is because the Atlanta Shanahan had multiple good options on every play. In San Francsco, at least in the short term, he’ll be dealing with minimal options. That could speed up his choices, as in “What the hell, we don’t have Julio Jones.” But it could also mean more delays, as in, “Okay, him . . . no, maybe not . . . no, he just screwed up that play last series . . . oh, damn it, time out!”

In short, it’s growing pains season here, children. On the field, on the sidelines, and maybe even in Kyle Shanahan’s head.